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Packages that use BibRefException | |
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org.biojava.bibliography | The data structures and interfaces included in this package define an interoperable framework for bibliographic searches. |
Uses of BibRefException in org.biojava.bibliography |
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Methods in org.biojava.bibliography that throw BibRefException | |
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void |
BibRefSupport.connect()
It creates a connection to an object providing the supporting utilities, or/and it makes all necessary initialization steps needed for further communication. |
void |
BibRefQuery.connect()
It creates a connection to a bibliographic repository, or/and it makes all necessary initialization steps needed for further communication. |
void |
BibRefQuery.connect(byte[] collectionId)
It creates a connection to a bibliographic repository, or/and it makes all necessary initialization steps needed for further communication, and it makes the collection described by collectionId the current collection. |
void |
BibRefQuery.destroy()
It frees all resources related to this query collection. |
BibRefQuery |
BibRefQuery.find(String[] keywords,
String[] attrs,
Hashtable properties)
The easiest direct method for querying a repository. |
BibRefQuery |
BibRefQuery.findByAuthor(BiblioProvider author,
Hashtable properties)
This is a convenient method for a common query. |
BibRef |
BibRefQuery.findById(String bibRefId)
This is a convenient method returning just one citation. |
BibRef |
BibRefQuery.findById(String bibRefId,
String[] onlyAttrs)
This is a convenient method returning just one citation, perhaps with a limited number of attributes. |
BibRef[] |
BibRefQuery.getAllBibRefs()
It returns all citations from the current collection as a (possibly big) array. |
BibRef[] |
BibRefQuery.getAllBibRefs(String[] onlyAttrs)
It returns all citations from the current collection as a (possibly big) array, perhaps with a limited number of attributes. |
InputStream |
BibRefQuery.getAllBibRefsAsXML()
It returns all citations from the current collection as an XML stream. |
String[] |
BibRefQuery.getAllIDs()
A convenient method returning just identifiers of all current citations. |
String |
BibRefQuery.getBibRefAsXML(BibRef bibRef)
A convenient utility method converting a given citation to its XML representation. |
int |
BibRefQuery.getBibRefCount()
It returns the number of citations in the current collection. |
Enumeration |
BibRefQuery.getBibRefs()
It returns an enumeration of all citations from the current collection. |
Enumeration |
BibRefQuery.getBibRefs(String[] onlyAttrs)
It returns an enumeration of all citations from the current collection, perhaps with a limited number of attributes. |
Enumeration |
BibRefQuery.getBibRefsAsXML()
It returns an enumeration of all citations from the current collection. |
BiblioCriterion[] |
BibRefSupport.getSupportedCriteria()
It returns all supported searching and sorting criteria for the whole bibliographic repository. |
BiblioCriterion[] |
BibRefSupport.getSupportedCriteria(String repositorySubset)
It returns all supported searching and sorting criteria in the given repository subset. |
CandyVocabulary |
BibRefSupport.getSupportedValues(String resourceType,
String attrName)
It returns a controlled vocabulary containing all possible values of the attribute given in attrName in the context given in resourceType. |
CandyFinder |
BibRefSupport.getVocabularyFinder()
It returns an object representing a central place where all controlled vocabularies can be received from and shared by all users. |
BibRefQuery |
BibRefQuery.query(String query,
Hashtable properties)
It queries the current collection using a query language. |
BibRefQuery |
BibRefQuery.sort(String[] orderedBy,
Hashtable properties)
It sorts the current collection and returns another collection which is a sorted copy of the current collection. |
BibRefQuery |
BibRefSupport.union(BibRefQuery[] collections,
Hashtable properties)
It merges all given collections together. |
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