Uses of Interface
org.biojavax.bio.seq.RichFeature

Packages that use RichFeature
org.biojavax.bio.seq Rich implementations of Sequences, Locations and Features. 
org.biojavax.bio.seq.io Classes to support the I/O of RichSequence and Bioentry objects. 
 

Uses of RichFeature in org.biojavax.bio.seq
 

Classes in org.biojavax.bio.seq that implement RichFeature
 class SimpleRichFeature
          A simple implementation of RichFeature.
 

Methods in org.biojavax.bio.seq that return RichFeature
static RichFeature RichFeature.Tools.enrich(Feature f)
          Takes a normal Feature and attempts to convert it into a RichFeature.
 RichFeature RichLocation.getFeature()
          Retrieves the feature this location is associated with.
 RichFeature SimpleRichLocation.getFeature()
          Retrieves the feature this location is associated with.
 RichFeature EmptyRichLocation.getFeature()
          Retrieves the feature this location is associated with.
 RichFeature SimpleRichFeatureRelationship.getObject()
          Returns the object of this relationship (ie.
 RichFeature RichFeatureRelationship.getObject()
          Returns the object of this relationship (ie.
 RichFeature SimpleRichFeatureRelationship.getSubject()
          Gets the feature that this relationship refers to.
 RichFeature RichFeatureRelationship.getSubject()
          Gets the feature that this relationship refers to.
static RichFeature RichFeature.Tools.makeEmptyFeature()
          A way to make a dummy feature
 

Methods in org.biojavax.bio.seq with parameters of type RichFeature
 void RichLocation.setFeature(RichFeature feature)
          Sets the feature this location is associated with.
 void SimpleRichLocation.setFeature(RichFeature feature)
          Sets the feature this location is associated with.
 void CompoundRichLocation.setFeature(RichFeature feature)
          Sets the feature this location is associated with.
 void EmptyRichLocation.setFeature(RichFeature feature)
          Sets the feature this location is associated with.
 

Constructors in org.biojavax.bio.seq with parameters of type RichFeature
SimpleRichFeatureRelationship(RichFeature object, RichFeature subject, ComparableTerm term, int rank)
          Creates a new instance of SimpleRichFeatureRelationship.
 

Uses of RichFeature in org.biojavax.bio.seq.io
 

Fields in org.biojavax.bio.seq.io declared as RichFeature
protected  RichFeature RichSeqIOAdapter.emptyFeature
          This is a dummy feature.
 

Methods in org.biojavax.bio.seq.io that return RichFeature
 RichFeature RichSeqIOAdapter.getCurrentFeature()
           
 RichFeature DebuggingRichSeqIOListener.getCurrentFeature()
           
 RichFeature SimpleRichSequenceBuilder.getCurrentFeature()
          Gets the feature currently being created.
 RichFeature RichSeqIOListener.getCurrentFeature()
          Gets the feature currently being created.