Uses of Class
org.biojava.bio.seq.io.agave.AGAVEDbId

Packages that use AGAVEDbId
org.biojava.bio.seq.io.agave Classes for converting between AGAVE XML and BioJava objects. 
 

Uses of AGAVEDbId in org.biojava.bio.seq.io.agave
 

Methods in org.biojava.bio.seq.io.agave that return AGAVEDbId
 AGAVEDbId[] AGAVEAnnotFilter.getAltIds(Annotation annot)
           
 AGAVEDbId[] SimpleAnnotFilter.getAltIds(Annotation annot)
           
 AGAVEDbId[] Agave2AgaveAnnotFilter.getAltIds(Annotation annot)
           
 AGAVEDbId AGAVEQueryRegion.getDbId()
           
 AGAVEDbId AGAVEMatchRegion.getDbId()
           
 AGAVEDbId AGAVEXref.getDbId()
           
 AGAVEDbId AGAVEAnnotFilter.getDbId(Annotation annot)
           
 AGAVEDbId SimpleAnnotFilter.getDbId(Annotation annot)
           
 AGAVEDbId Agave2AgaveAnnotFilter.getDbId(Annotation annot)
           
 AGAVEDbId Embl2AgaveAnnotFilter.getDbId(Annotation annot)
           
 

Methods in org.biojava.bio.seq.io.agave with parameters of type AGAVEDbId
 void AGAVEMapPosition.addDbId(AGAVEDbId id)
           
 void AGAVEMapPositionPropHandler.addDbId(AGAVEDbId db_id)
           
 void AGAVEXrefPropHandler.addDbId(AGAVEDbId db_id)
           
 void AGAVEQueryRegionPropHandler.addDbId(AGAVEDbId db_id)
           
 void AGAVEDbIdCallbackItf.addDbId(AGAVEDbId db_id)
           
 void AGAVEAltIdsPropHandler.addDbId(AGAVEDbId db_id)
           
 void AGAVEXrefs.addDbId(AGAVEDbId id)
          add @param id
 void AGAVEMatchRegionPropHandler.addDbId(AGAVEDbId id)
           
 void AGAVEXrefsPropHandler.addDbId(AGAVEDbId db_id)
           
 void AGAVEQueryRegion.setDbId(AGAVEDbId id)
           
 void AGAVEMatchRegion.setDbId(AGAVEDbId id)
           
 void AGAVEXref.setDbId(AGAVEDbId id)