org.biojava.bio.gui.sequence
Class PeptideDigestRenderer
java.lang.Object
org.biojava.utils.AbstractChangeable
org.biojava.bio.gui.sequence.MultiLineRenderer
org.biojava.bio.gui.sequence.AbstractPeptideDigestRenderer
org.biojava.bio.gui.sequence.PeptideDigestRenderer
- All Implemented Interfaces:
- Serializable, SequenceRenderer, Changeable
public class PeptideDigestRenderer
- extends AbstractPeptideDigestRenderer
A concrete AbstractPeptideDigestRenderer. The features matching the given FeatureFilter
are rendered as blue arrows.
- Since:
- 1.5
- Author:
- Mark Southern
- See Also:
- Serialized Form
Methods inherited from class org.biojava.bio.gui.sequence.MultiLineRenderer |
_addRenderer, _removeRenderer, addRenderer, clearRenderers, getChangeSupport, getDepth, getMinimumLeader, getMinimumTrailer, paint, processMouseEvent, removeRenderer |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
DIGEST
public static final ChangeType DIGEST
PeptideDigestRenderer
public PeptideDigestRenderer(FeatureSource source)
PeptideDigestRenderer
public PeptideDigestRenderer(FeatureSource source,
FeatureFilter filter)
PeptideDigestRenderer
public PeptideDigestRenderer(FeatureSource source,
FeatureFilter filter,
int distanceBetweenFeatures)
setDefaultPaint
public void setDefaultPaint(Paint p)
getDefaultPaint
public Paint getDefaultPaint()
createRenderer
public FeatureRenderer createRenderer(int lane)
- Specified by:
createRenderer
in class AbstractPeptideDigestRenderer